Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFL94510.1General secretion pathway protein I. (131 aa)    
Predicted Functional Partners:
SFL94561.1
General secretion pathway protein K.
  
 
 0.928
SFL94483.1
General secretion pathway protein H.
       0.855
SFL94536.1
General secretion pathway protein J.
       0.826
SFK53928.1
General secretion pathway protein E.
  
 0.783
SFK96484.1
General secretion pathway protein E.
  
 0.783
SFK54047.1
General secretion pathway protein F.
  
  
 0.710
SFK96463.1
General secretion pathway protein F.
  
  
 0.710
SFK39639.1
General secretion pathway protein K.
  
 
 0.679
SFK54094.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
     
  0.651
SFK57768.1
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
   
    0.552
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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