Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL08640.1 | SFL45943.1 | SAMN04488125_108143 | SAMN04488125_11592 | Hypothetical protein. | Porin subfamily protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. | 0.685 |
SFL08640.1 | SFL96307.1 | SAMN04488125_108143 | SAMN04488125_13319 | Hypothetical protein. | Hypothetical protein. | 0.438 |
SFL45943.1 | SFL08640.1 | SAMN04488125_11592 | SAMN04488125_108143 | Porin subfamily protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. | Hypothetical protein. | 0.685 |
SFL45943.1 | SFL96307.1 | SAMN04488125_11592 | SAMN04488125_13319 | Porin subfamily protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. | Hypothetical protein. | 0.421 |
SFL50544.1 | SFL96307.1 | SAMN04488125_116121 | SAMN04488125_13319 | Phage shock protein A (PspA) family protein. | Hypothetical protein. | 0.436 |
SFL96307.1 | SFL08640.1 | SAMN04488125_13319 | SAMN04488125_108143 | Hypothetical protein. | Hypothetical protein. | 0.438 |
SFL96307.1 | SFL45943.1 | SAMN04488125_13319 | SAMN04488125_11592 | Hypothetical protein. | Porin subfamily protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. | 0.421 |
SFL96307.1 | SFL50544.1 | SAMN04488125_13319 | SAMN04488125_116121 | Hypothetical protein. | Phage shock protein A (PspA) family protein. | 0.436 |
SFL96307.1 | SFL96358.1 | SAMN04488125_13319 | SAMN04488125_13320 | Hypothetical protein. | Putative membrane protein. | 0.584 |
SFL96307.1 | hemE | SAMN04488125_13319 | SAMN04488125_13321 | Hypothetical protein. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.531 |
SFL96358.1 | SFL96307.1 | SAMN04488125_13320 | SAMN04488125_13319 | Putative membrane protein. | Hypothetical protein. | 0.584 |
SFL96358.1 | hemE | SAMN04488125_13320 | SAMN04488125_13321 | Putative membrane protein. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.845 |
hemE | SFL96307.1 | SAMN04488125_13321 | SAMN04488125_13319 | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | Hypothetical protein. | 0.531 |
hemE | SFL96358.1 | SAMN04488125_13321 | SAMN04488125_13320 | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | Putative membrane protein. | 0.845 |