Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFM00432.1Protein N-acetyltransferase, RimJ/RimL family. (158 aa)    
Predicted Functional Partners:
SFM00460.1
Hypothetical protein.
 
     0.923
SFK39844.1
Phage Tail Collar Domain.
 
     0.818
aroB
3-dehydroquinate synthase /shikimate kinase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
    
  0.717
SFK50242.1
Uncharacterized conserved protein, DUF1778 family.
   
 
 0.715
ureB
Urease subunit gamma/beta; Belongs to the urease beta subunit family.
  
 
  0.672
SFL61901.1
Hypothetical protein.
 
  
 0.578
SFL61958.1
tRNA threonylcarbamoyl adenosine modification protein YeaZ.
  
 
 0.554
aroK
Transcriptional regulator, XRE family with shikimate kinase activity /shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
    
  0.544
SFL26890.1
HxxPF-repeated domain-containing protein.
 
   
 0.518
SFK66764.1
Urea carboxylase.
   
  0.478
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.