Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFM01340.1SMP-30/Gluconolaconase/LRE-like region-containing protein. (74 aa)    
Predicted Functional Partners:
SFM01364.1
Catechol 2,3-dioxygenase.
 
    0.837
SFL02155.1
Gluconokinase.
    
 0.639
SFM01242.1
Choline dehydrogenase.
 
 
 0.617
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
  
 
 0.608
SFM01291.1
Hypothetical protein.
 
     0.549
SFL52311.1
3-hydroxyethyl bacteriochlorophyllide a dehydrogenase.
  
 
  0.521
SFK88621.1
Sugar lactone lactonase YvrE.
  
  
  0.519
SFL71941.1
Choline dehydrogenase.
  
 
 0.504
SFM01316.1
Transposase.
  
    0.497
SFL93471.1
Predicted dehydrogenase.
 
 
 0.472
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.