Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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SFM04039.1DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. (462 aa)    
Predicted Functional Partners:
SFM04012.1
Signal transduction histidine kinase.
 
 
 0.915
SFL04946.1
Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL.
 
 0.897
SFL69197.1
RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.839
SFL38841.1
PAS domain S-box-containing protein.
  
 0.826
SFL71628.1
PAS domain S-box-containing protein.
  
 0.826
SFL81314.1
Sensor domain CHASE3-containing protein.
 
 0.801
SFL63346.1
Two-component system, NarL family, sensor histidine kinase BarA.
  
 0.783
SFK76788.1
PAS domain S-box-containing protein.
  
 0.779
SFK92251.1
PAS domain S-box-containing protein.
  
 0.779
SFL28865.1
PAS domain S-box-containing protein.
  
 0.779
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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