Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SFM05719.1Integrase core domain-containing protein. (157 aa)    
Predicted Functional Partners:
SFM05690.1
Putative transposase.
 
     0.708
SFL58627.1
Putative transposase.
  
     0.651
SFM05748.1
Na+/H+ antiporter 1; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons.
       0.556
SFM09280.1
Putative transposase.
 
     0.542
SFL58583.1
Putative transposase.
 
     0.537
SFM05773.1
Uncharacterized membrane protein.
       0.416
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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