STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM10087.1Putative transposase of IS4/5 family. (121 aa)    
Predicted Functional Partners:
SFM10062.1
Transposase.
     0.926
SFL79596.1
Transposase.
     0.695
SFK54294.1
Transposase.
     0.683
SFL63745.1
Transposase.
 
     0.621
SFM00871.1
Transposase.
 
     0.621
SFM01610.1
Transposase.
 
     0.621
SFM10111.1
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase).
       0.572
SFL59188.1
Transposase.
 
     0.519
SFM06128.1
Transposase.
 
     0.519
SFM05613.1
Transposase.
 
     0.519
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.