Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
SFM10132.1Porin. (482 aa)    
Predicted Functional Partners:
SFK96818.1
Porin, OprB family.
  
     0.659
SFL01929.1
Putative membrane protein.
  
     0.656
SFK27989.1
Putative membrane protein.
  
     0.649
SFL12533.1
Uncharacterized membrane protein YccC.
  
   
 0.641
SFL01985.1
Hopanoid biosynthesis associated radical SAM protein HpnJ.
  
     0.622
SFL19886.1
PAP2 superfamily protein.
  
     0.541
SFL01966.1
Ceramide glucosyltransferase.
  
     0.531
SFL67085.1
Hypothetical protein.
  
     0.510
SFM10111.1
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase).
       0.487
SFL02005.1
Hopanoid biosynthesis associated protein HpnK.
  
     0.456
Your Current Organism:
Methylorubrum salsuginis
NCBI taxonomy Id: 414703
Other names: CGMCC 1.6474, M. salsuginis, Methylobacterium salsuginis, Methylobacterium salsuginis Wang et al. 2007, NCCB 100140, NCIMB 14847, strain MR
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