STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANU23129.1LD-carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)    
Predicted Functional Partners:
ANU23130.1
GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.816
ANU23128.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.727
ANU23127.1
Sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.468
Your Current Organism:
Planococcus donghaensis
NCBI taxonomy Id: 414778
Other names: DSM 22276, KCTC 13050, LMG 23779, LMG:23779, P. donghaensis, Planococcus donghaensis Choi et al. 2007, strain JH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.