STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANU23476.1Competence protein ComG; Required for transformation and DNA binding. (104 aa)    
Predicted Functional Partners:
ANU23477.1
Competence protein ComG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.968
ANU23478.1
Competence protein ComG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.960
ANU23474.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.943
ANU24849.1
Competence protein ComG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.914
ANU23600.1
Type II secretion system protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.829
ANU24854.1
Type II secretion system protein GspE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.828
ANU22664.1
DNA/RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.794
ANU23595.1
Prepilin peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.733
ANU23599.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.683
ANU23605.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.683
Your Current Organism:
Planococcus donghaensis
NCBI taxonomy Id: 414778
Other names: DSM 22276, KCTC 13050, LMG 23779, LMG:23779, P. donghaensis, Planococcus donghaensis Choi et al. 2007, strain JH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.