STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY96586.1ABC-2 type transport system ATP-binding protein. (291 aa)    
Predicted Functional Partners:
SDY96559.1
GntR family transcriptional regulator.
 
  
 0.952
SDY96612.1
ABC-2 family transporter protein.
       0.782
SDZ05044.1
ABC-2 family transporter protein.
  
 0.658
SDY54732.1
ABC-2 family transporter protein.
  
 0.645
SDY54757.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
 0.645
SDZ13774.1
ABC-type polysaccharide/polyol phosphate export permease.
  
 
 0.640
SDY55184.1
DNA-binding transcriptional regulator YhcF, GntR family.
 
  
 0.568
SDY92804.1
ABC-type multidrug transport system, ATPase and permease component.
  
 
  0.557
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.509
atpA
ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.497
Your Current Organism:
Proteiniborus ethanoligenes
NCBI taxonomy Id: 415015
Other names: CGMCC 1.5055, DSM 21650, JCM 14574, P. ethanoligenes, Proteiniborus ethanoligenes Niu et al. 2008, strain GW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.