Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDY57418.1 | SDZ15387.1 | SAMN05660462_00383 | SAMN05660462_02022 | Stage II sporulation protein E. | Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family. | 0.746 |
| SDY57418.1 | SDZ15420.1 | SAMN05660462_00383 | SAMN05660462_02024 | Stage II sporulation protein E. | RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.702 |
| SDY57418.1 | SDZ15452.1 | SAMN05660462_00383 | SAMN05660462_02026 | Stage II sporulation protein E. | Stage V sporulation protein AA. | 0.601 |
| SDY57418.1 | SDZ15470.1 | SAMN05660462_00383 | SAMN05660462_02027 | Stage II sporulation protein E. | Stage V sporulation protein AB. | 0.625 |
| SDY57418.1 | SDZ15489.1 | SAMN05660462_00383 | SAMN05660462_02028 | Stage II sporulation protein E. | Stage V sporulation protein AC. | 0.733 |
| SDY57418.1 | SDZ15508.1 | SAMN05660462_00383 | SAMN05660462_02029 | Stage II sporulation protein E. | Stage V sporulation protein AD. | 0.750 |
| SDY57418.1 | SDZ15526.1 | SAMN05660462_00383 | SAMN05660462_02030 | Stage II sporulation protein E. | Stage V sporulation protein AE. | 0.737 |
| SDY57418.1 | spoIIAB | SAMN05660462_00383 | SAMN05660462_02023 | Stage II sporulation protein E. | Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.867 |
| SDZ15387.1 | SDY57418.1 | SAMN05660462_02022 | SAMN05660462_00383 | Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family. | Stage II sporulation protein E. | 0.746 |
| SDZ15387.1 | SDZ15420.1 | SAMN05660462_02022 | SAMN05660462_02024 | Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family. | RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.975 |
| SDZ15387.1 | SDZ15437.1 | SAMN05660462_02022 | SAMN05660462_02025 | Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family. | Hypothetical protein. | 0.521 |
| SDZ15387.1 | SDZ15452.1 | SAMN05660462_02022 | SAMN05660462_02026 | Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family. | Stage V sporulation protein AA. | 0.726 |
| SDZ15387.1 | SDZ15470.1 | SAMN05660462_02022 | SAMN05660462_02027 | Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family. | Stage V sporulation protein AB. | 0.739 |
| SDZ15387.1 | SDZ15489.1 | SAMN05660462_02022 | SAMN05660462_02028 | Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family. | Stage V sporulation protein AC. | 0.833 |
| SDZ15387.1 | SDZ15508.1 | SAMN05660462_02022 | SAMN05660462_02029 | Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family. | Stage V sporulation protein AD. | 0.832 |
| SDZ15387.1 | SDZ15526.1 | SAMN05660462_02022 | SAMN05660462_02030 | Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family. | Stage V sporulation protein AE. | 0.829 |
| SDZ15387.1 | SDZ15546.1 | SAMN05660462_02022 | SAMN05660462_02031 | Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family. | Stage V sporulation protein AE. | 0.529 |
| SDZ15387.1 | spoIIAB | SAMN05660462_02022 | SAMN05660462_02023 | Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family. | Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.999 |
| SDZ15420.1 | SDY57418.1 | SAMN05660462_02024 | SAMN05660462_00383 | RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage II sporulation protein E. | 0.702 |
| SDZ15420.1 | SDZ15387.1 | SAMN05660462_02024 | SAMN05660462_02022 | RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family. | 0.975 |
page 1 of 6