Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDY56113.1 | SDY75042.1 | SAMN05660462_00335 | SAMN05660462_00818 | Dihydrolipoamide dehydrogenase. | Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 0.409 |
SDY56113.1 | SDZ12125.1 | SAMN05660462_00335 | SAMN05660462_01918 | Dihydrolipoamide dehydrogenase. | Acetolactate synthase, large subunit. | 0.760 |
SDY56113.1 | SDZ21258.1 | SAMN05660462_00335 | SAMN05660462_02235 | Dihydrolipoamide dehydrogenase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.946 |
SDY56113.1 | SDZ21406.1 | SAMN05660462_00335 | SAMN05660462_02244 | Dihydrolipoamide dehydrogenase. | Hypothetical protein. | 0.832 |
SDY56113.1 | SDZ21580.1 | SAMN05660462_00335 | SAMN05660462_02254 | Dihydrolipoamide dehydrogenase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.933 |
SDY56113.1 | SDZ23059.1 | SAMN05660462_00335 | SAMN05660462_02312 | Dihydrolipoamide dehydrogenase. | Glycine/D-amino acid oxidase. | 0.923 |
SDY56113.1 | SDZ30491.1 | SAMN05660462_00335 | SAMN05660462_02616 | Dihydrolipoamide dehydrogenase. | GMP synthase (glutamine-hydrolysing). | 0.644 |
SDY56113.1 | guaB | SAMN05660462_00335 | SAMN05660462_02615 | Dihydrolipoamide dehydrogenase. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.735 |
SDY56113.1 | ispH | SAMN05660462_00335 | SAMN05660462_01082 | Dihydrolipoamide dehydrogenase. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.669 |
SDY75042.1 | SDY56113.1 | SAMN05660462_00818 | SAMN05660462_00335 | Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Dihydrolipoamide dehydrogenase. | 0.409 |
SDY75042.1 | SDZ21258.1 | SAMN05660462_00818 | SAMN05660462_02235 | Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.791 |
SDY75042.1 | SDZ21406.1 | SAMN05660462_00818 | SAMN05660462_02244 | Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | Hypothetical protein. | 0.869 |
SDY78182.1 | SDZ12125.1 | SAMN05660462_00892 | SAMN05660462_01918 | Serine protease Do. | Acetolactate synthase, large subunit. | 0.756 |
SDY78182.1 | SDZ21406.1 | SAMN05660462_00892 | SAMN05660462_02244 | Serine protease Do. | Hypothetical protein. | 0.746 |
SDY78182.1 | SDZ23059.1 | SAMN05660462_00892 | SAMN05660462_02312 | Serine protease Do. | Glycine/D-amino acid oxidase. | 0.782 |
SDY78182.1 | SDZ30491.1 | SAMN05660462_00892 | SAMN05660462_02616 | Serine protease Do. | GMP synthase (glutamine-hydrolysing). | 0.558 |
SDY78182.1 | guaB | SAMN05660462_00892 | SAMN05660462_02615 | Serine protease Do. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.527 |
SDY78182.1 | ispH | SAMN05660462_00892 | SAMN05660462_01082 | Serine protease Do. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.419 |
SDZ12125.1 | SDY56113.1 | SAMN05660462_01918 | SAMN05660462_00335 | Acetolactate synthase, large subunit. | Dihydrolipoamide dehydrogenase. | 0.760 |
SDZ12125.1 | SDY78182.1 | SAMN05660462_01918 | SAMN05660462_00892 | Acetolactate synthase, large subunit. | Serine protease Do. | 0.756 |
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