STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ30542.1Hypothetical protein. (221 aa)    
Predicted Functional Partners:
SDZ30560.1
Site-specific DNA-methyltransferase (adenine-specific).
 
   
 0.955
SDZ30577.1
Superfamily II DNA or RNA helicase.
 
   
 0.949
SDY44993.1
Eco57I restriction-modification methylase.
   
 0.762
SDZ30525.1
DNA-binding transcriptional regulator, XRE family.
       0.750
SDY43689.1
Type I restriction enzyme, S subunit.
  
 
 0.637
SDY74345.1
Type I restriction enzyme, S subunit.
  
 
 0.637
SDY74419.1
Type I restriction modification DNA specificity domain-containing protein.
  
 
 0.637
SDY76408.1
Type I restriction enzyme, S subunit.
  
 
 0.637
SDZ00392.1
Type I restriction enzyme, S subunit.
  
 
 0.637
SDZ24478.1
Type I restriction enzyme, S subunit.
  
 
 0.637
Your Current Organism:
Proteiniborus ethanoligenes
NCBI taxonomy Id: 415015
Other names: CGMCC 1.5055, DSM 21650, JCM 14574, P. ethanoligenes, Proteiniborus ethanoligenes Niu et al. 2008, strain GW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.