STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ38685.1Regulatory protein, luxR family. (116 aa)    
Predicted Functional Partners:
SDY55237.1
Signal transduction histidine kinase.
  
 0.992
SDZ18106.1
GAF domain-containing protein.
   
 0.829
SDZ38697.1
Uncharacterized membrane protein.
 
     0.802
SDY91390.1
PAS domain S-box-containing protein.
  
 0.763
SDY56266.1
Diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.698
SDY77345.1
Polar amino acid transport system substrate-binding protein.
   
 0.698
SDZ02981.1
Flagellar motor switch protein FliN/FliY.
  
 
  0.694
SDZ38741.1
TPR repeat-containing protein.
   
 0.642
SDY99493.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.630
SDZ38711.1
Hypothetical protein.
       0.601
Your Current Organism:
Proteiniborus ethanoligenes
NCBI taxonomy Id: 415015
Other names: CGMCC 1.5055, DSM 21650, JCM 14574, P. ethanoligenes, Proteiniborus ethanoligenes Niu et al. 2008, strain GW
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