STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX20467.1Hypothetical protein; KEGG: bce:BC2063 4.0e-05 alanine racemase K01775; COG: COG3457 Predicted amino acid racemase; Psort location: Cytoplasmic, score:8.96. (367 aa)    
Predicted Functional Partners:
ABX20465.1
Hypothetical protein; KEGG: stt:t0504 7.3e-255 putative amino acid decarboxylase K01586; COG: COG0019 Diaminopimelate decarboxylase; Psort location: Cytoplasmic, score:8.96.
 
  
 0.993
ABX20466.1
Hypothetical protein; KEGG: eci:UTI89_C0120 1.3e-05 aroP; aromatic amino acid transport protein AroP K03293; COG: COG0531 Amino acid transporters; Psort location: CytoplasmicMembrane, score:10.00.
 
     0.862
arcA
Hypothetical protein; KEGG: sty:STY4805 1.6e-218 arginine deiminase K01478; COG: COG2235 Arginine deiminase; Psort location: Cytoplasmic, score:8.96.
 
  
  0.852
ABX23023.1
Hypothetical protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
  
  0.838
ABX23017.1
Hypothetical protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
 
  
  0.836
argE
Hypothetical protein; KEGG: stt:t3504 4.4e-209 argE; acetylornithine deacetylase K01438; COG: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; Psort location: Cytoplasmic, score:8.96; Belongs to the peptidase M20A family. ArgE subfamily.
    
  0.802
argH
Hypothetical protein; KEGG: sec:SC4013 1.6e-236 argH; argininosuccinate lyase K01755; COG: COG0165 Argininosuccinate lyase; Psort location: Cytoplasmic, score:8.96.
     
  0.800
ABX20468.1
Hypothetical protein; KEGG: eci:UTI89_C0120 2.6e-53 aroP; aromatic amino acid transport protein AroP K03293; COG: COG0833 Amino acid transporters; Psort location: CytoplasmicMembrane, score:10.00.
       0.645
ubiX
Hypothetical protein; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
       0.575
ABX22071.1
Hypothetical protein; KEGG: fnu:FN1854 1.7e-58 methylaspartate mutase K01846; COG: NOG07779 non supervised orthologous group.
 
     0.550
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.