STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX20471.1Hypothetical protein; KEGG: bur:Bcep18194_A4695 6.8e-30 ABC polar amino acid transporter, periplasmic ligand binding protein K01713; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: Periplasmic, score:10.00; Belongs to the bacterial solute-binding protein 3 family. (260 aa)    
Predicted Functional Partners:
ABX20472.1
Hypothetical protein; KEGG: sma:SAV6546 1.6e-23 putative ABC transporter permease K02028; COG: COG4215 ABC-type arginine transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.998
ABX20473.1
Hypothetical protein; KEGG: sma:SAV6546 6.5e-25 putative ABC transporter permease K02028; COG: COG4160 ABC-type arginine/histidine transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.998
ABX20474.1
Hypothetical protein; KEGG: stm:STM2351 1.0e-131 hisP; ABC superfamily (atp_bind), histidine and lysine/arginine/ornithine transport protein K02028; COG: COG4598 ABC-type histidine transport system, ATPase component; Psort location: CytoplasmicMembrane, score:7.88.
 
 
 0.997
ABX21975.1
Hypothetical protein; KEGG: bja:blr4464 2.5e-28 probable ABC transporter ATP-binding/permease protein K02028:K02029; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.959
ABX20896.1
Hypothetical protein; KEGG: hpa:HPAG1_0922 1.7e-40 amino acid ABC transporter, permease protein; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.938
ABX21601.1
Hypothetical protein; KEGG: bur:Bcep18194_A3548 6.5e-18 ABC amino acid transporter, periplasmic ligand binding protein K02030:K02424; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: Periplasmic, score:9.76.
  
  
 
0.911
ABX21920.1
Hypothetical protein; KEGG: eca:ECA0855 3.5e-19 ABC transporter permease protein K02028; COG: COG4160 ABC-type arginine/histidine transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
  
 0.873
ABX22143.1
Hypothetical protein; KEGG: ret:RHE_PF00254 1.5e-26 glnP, glnQ; glutamine ABC transporter, ATP-binding protein K02028; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.841
ABX21918.1
Hypothetical protein; KEGG: stm:STM0891 1.2e-126 artP; ABC superfamily (atp&memb), arginine transport system K02028; COG: COG4161 ABC-type arginine transport system, ATPase component; Psort location: CytoplasmicMembrane, score:7.88.
 
  
 0.835
ABX20897.1
Hypothetical protein; KEGG: spt:SPA0918 2.2e-120 yecC; putative ABC transport ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score:7.88.
 
 
 0.824
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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