STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX20475.1KEGG: ava:Ava_0206 9.2e-58 hypothetical protein; COG: COG1090 Predicted nucleoside-diphosphate sugar epimerase; Psort location: Cytoplasmic, score:8.96. (297 aa)    
Predicted Functional Partners:
ABX20487.1
COG: COG1288 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:10.00.
      
 0.883
ABX20237.1
Hypothetical protein; KEGG: sec:SC2577 3.6e-175 lepB; leader peptidase (signal peptidase I), serine protease K03100; COG: COG0681 Signal peptidase I; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the peptidase S26 family.
   
    0.786
ABX21908.1
Hypothetical protein; KEGG: eci:UTI89_C0872 4.5e-216 ybjT; hypothetical protein YbjT K00329:K00356; COG: COG0702 Predicted nucleoside-diphosphate-sugar epimerases; Psort location: CytoplasmicMembrane, score:9.82.
 
    0.701
ABX23127.1
Hypothetical protein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids.
     0.659
minE
Hypothetical protein; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
   
  
 0.622
ABX20476.1
Hypothetical protein; KEGG: eci:UTI89_C2586 4.3e-92 yfcG; putative S-transferase K00799; COG: COG0625 Glutathione S-transferase.
       0.556
zupT
Hypothetical protein; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily.
  
    0.532
arcA
Hypothetical protein; KEGG: sty:STY4805 1.6e-218 arginine deiminase K01478; COG: COG2235 Arginine deiminase; Psort location: Cytoplasmic, score:8.96.
   
    0.513
ABX23455.1
Hypothetical protein; Cleaves 6-deoxy-6-sulfo-D-fructose 1-phosphate (SFP) to form dihydroxyacetone phosphate (DHAP) and 3-sulfolactaldehyde (SLA). Belongs to the aldolase LacD family.
   
    0.512
ABX20207.1
COG: COG1544 Ribosome-associated protein Y (PSrp-1); Psort location: Cytoplasmic, score:8.96.
   
    0.499
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.