STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX20495.1Hypothetical protein; KEGG: sec:SC2332 1.0e-218 yfbQ; putative aminotransferase (ortho), paral putative regulator K00812; COG: COG0436 Aspartate/tyrosine/aromatic aminotransferase; Psort location: Cytoplasmic, score:8.96. (404 aa)    
Predicted Functional Partners:
ABX21843.1
Hypothetical protein; KEGG: stt:t1936 1.8e-205 aspC; aspartate aminotransferase K00813; COG: COG1448 Aspartate/tyrosine/aromatic aminotransferase; Psort location: Cytoplasmic, score:9.26.
   
 0.931
ilvD
Hypothetical protein; KEGG: spt:SPA3743 0. ilvD; dihydroxyacid dehydratase K01687; COG: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; Psort location: Cytoplasmic, score:8.96; Belongs to the IlvD/Edd family.
   
 
 0.916
ilvE
Hypothetical protein; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.914
leuA
Hypothetical protein; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
  
 
 0.913
ABX23765.1
Hypothetical protein; KEGG: stt:t3854 2.2e-223 avtA; valine--pyruvate aminotransferase K00835; COG: COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase; Psort location: Cytoplasmic, score:8.96.
     
 0.911
argA
Hypothetical protein; KEGG: stt:t2900 6.0e-228 argA; N-acetylglutamate synthase K00619; COG: COG0548 Acetylglutamate kinase; Psort location: Cytoplasmic, score:8.96; Belongs to the acetyltransferase family. ArgA subfamily.
  
 
 0.911
ABX21049.1
Hypothetical protein; KEGG: stm:STM1795 3.8e-235 putative glutamic dehyrogenase-like protein K00261; COG: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Psort location: Cytoplasmic, score:9.97; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.908
ABX21571.1
Hypothetical protein; KEGG: spt:SPA1545 9.7e-237 gdhA; NADP-specific glutamate dehydrogenase K00262; COG: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Psort location: Cytoplasmic, score:9.97; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.908
ABX21638.1
Hypothetical protein; KEGG: sty:STY1278 2.8e-223 icdA; isocitrate dehydrogenase K00031; COG: COG0538 Isocitrate dehydrogenases; Psort location: Cytoplasmic, score:9.97.
   
 0.834
ABX22087.1
Hypothetical protein; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
  
  
  0.828
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.