STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX20514.1Hypothetical protein; KEGG: pca:Pcar_1199 0.00073 MCP methyltransferase, CheR-type K00575; COG: COG4575 Uncharacterized conserved protein. (103 aa)    
Predicted Functional Partners:
ABX20125.1
COG: COG1652 Uncharacterized protein containing LysM domain.
   
  
 0.894
ABX22327.1
COG: COG3126 Uncharacterized protein conserved in bacteria.
   
    0.889
ABX24175.1
COG: COG5393 Predicted membrane protein.
 
  
 0.879
ABX21765.1
Hypothetical protein; COG: NOG13872 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
   
    0.865
ABX24176.1
Hypothetical protein; COG: COG4575 Uncharacterized conserved protein; Psort location: Cytoplasmic, score:8.96.
  
   
0.825
ABX20116.1
Hypothetical protein; COG: COG4575 Uncharacterized conserved protein.
  
  
0.711
ABX22862.1
Hypothetical protein; KEGG: hit:NTHI0707 0.00029 fkbY; probable FKBP-type peptidyl-prolyl cis-trans isomerase K03772; COG: COG2823 Predicted periplasmic or secreted lipoprotein; Psort location: Periplasmic, score:10.00.
 
    0.647
ABX20513.1
Hypothetical protein; KEGG: vfi:VF0317 4.3e-28 acetyltransferase K02348; COG: COG2153 Predicted acyltransferase; Psort location: Cytoplasmic, score:8.96.
     
 0.646
ABX21433.1
COG: COG3133 Outer membrane lipoprotein.
  
    0.630
ABX24174.1
Hypothetical protein; COG: NOG11454 non supervised orthologous group.
 
    0.621
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.