STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fclHypothetical protein; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (321 aa)    
Predicted Functional Partners:
gmd
Hypothetical protein; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 0.999
gmm
Hypothetical protein; Hydrolyzes GDP-mannose; Belongs to the Nudix hydrolase family.
 
    0.979
ABX20712.1
Hypothetical protein; KEGG: eci:UTI89_C2324 1.2e-188 wcaI; putative colanic biosynthesis glycosyl transferase K03208; COG: COG0438 Glycosyltransferase.
 
  
 0.960
ABX20707.1
Hypothetical protein; KEGG: eci:UTI89_C2329 6.8e-94 wcaE; putative colanic acid biosynthesis glycosyl transferase; COG: COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
 0.937
ABX20713.1
Hypothetical protein; KEGG: sec:SC2106 2.9e-260 manC; mannose-1-phosphate in colanic acid gene cluster K00971; COG: COG0662 Mannose-6-phosphate isomerase; Psort location: Cytoplasmic, score:8.96.
 
  
 0.929
ABX20708.1
Hypothetical protein; KEGG: sec:SC2111 3.7e-93 wcaF; putative acyltransferase in colanic acid biosynthesis K03818; COG: COG0110 Acetyltransferase (isoleucine patch superfamily); Psort location: Cytoplasmic, score:9.26.
 
  
 0.916
ABX20705.1
Hypothetical protein; KEGG: eci:UTI89_C2331 8.9e-179 wcaC; putative glycosyltransferase K00754; COG: COG0438 Glycosyltransferase.
 
  
 0.879
ABX21449.1
Hypothetical protein; KEGG: shn:Shewana3_3435 0.00016 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
      
 0.876
ABX20706.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score:10.00.
  
    0.770
rpsS
Hypothetical protein; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.759
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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