STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX20910.1Hypothetical protein; KEGG: lpl:lp_3010 0.0065 pts23C; cellobiose PTS, EIIC K02761; COG: COG0814 Amino acid permeases; Psort location: CytoplasmicMembrane, score:10.00. (422 aa)    
Predicted Functional Partners:
ABX21200.1
Hypothetical protein; KEGG: eci:UTI89_C2502 6.9e-53 atoC; acetoacetate metabolism regulatory protein AtoC K07714; COG: COG3283 Transcriptional regulator of aromatic amino acids metabolism; Psort location: Cytoplasmic, score:8.96.
      
 0.801
ABX21743.1
Hypothetical protein; COG: NOG09737 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.634
ABX22691.1
Hypothetical protein; KEGG: eci:UTI89_C0120 3.3e-227 aroP; aromatic amino acid transport protein AroP K03293; COG: COG1113 Gamma-aminobutyrate permease and related permeases; Psort location: CytoplasmicMembrane, score:10.00.
      
 0.623
ABX20911.1
Hypothetical protein; COG: NOG14112 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
     0.605
trpR
Hypothetical protein; This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region.
  
   
 0.603
ABX23259.1
Hypothetical protein; KEGG: sty:STY4444 6.2e-203 tyrB; aromatic-amino-acid aminotransferase K00832; COG: COG1448 Aspartate/tyrosine/aromatic aminotransferase; Psort location: Cytoplasmic, score:9.26.
   
  
 0.602
yqfB
COG: COG3097 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.96; Belongs to the UPF0267 family.
  
     0.508
menC
Hypothetical protein; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
  
     0.431
ABX22169.1
Hypothetical protein; COG: COG3069 C4-dicarboxylate transporter; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.406
ABX24104.1
Hypothetical protein; COG: COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.400
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.