STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX20913.1Hypothetical protein; COG: NOG11332 non supervised orthologous group. (111 aa)    
Predicted Functional Partners:
flgH
Hypothetical protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
   0.865
flgI
Hypothetical protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
   0.853
ABX20915.1
Hypothetical protein.
       0.610
fliE
Hypothetical protein; COG: COG1677 Flagellar hook-basal body protein.
   
    0.499
ABX20870.1
Hypothetical protein; COG: COG3190 Flagellar biogenesis protein.
   
    0.463
ABX20914.1
KEGG: stm:STM1933 1.6e-108 hypothetical protein K01806; COG: COG0698 Ribose 5-phosphate isomerase RpiB.
       0.460
flhB
Hypothetical protein; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
   
    0.455
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.