STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX20981.1Hypothetical protein; COG: NOG09766 non supervised orthologous group. (116 aa)    
Predicted Functional Partners:
ABX20980.1
Hypothetical protein; COG: COG1276 Putative copper export protein; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.926
ABX20978.1
Hypothetical protein; KEGG: spt:SPA0993 4.0e-34 holE; DNA polymerase III, theta subunit K02345; COG: NOG13893 non supervised orthologous group.
 
     0.877
ABX20979.1
COG: COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC; Psort location: Periplasmic, score:9.76.
 
  
 0.793
ABX21970.1
COG: COG3637 Opacity protein and related surface antigens; Psort location: OuterMembrane, score:10.00.
  
     0.773
ABX24174.1
Hypothetical protein; COG: NOG11454 non supervised orthologous group.
  
     0.772
ABX20280.1
Hypothetical protein; COG: NOG06208 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.770
tus
Hypothetical protein; Trans-acting protein required for termination of DNA replication. Binds to DNA replication terminator sequences (terA to terF) to prevent the passage of replication forks. The termination efficiency will be affected by the affinity of this protein for the terminator sequence; Belongs to the Tus family.
  
     0.770
ABX21558.1
Hypothetical protein; COG: NOG09763 non supervised orthologous group.
  
     0.767
ABX21562.1
Hypothetical protein; COG: COG3678 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein; Psort location: Periplasmic, score:10.00.
  
     0.758
mzrA
Hypothetical protein; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.
  
     0.758
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.