STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX21222.1Hypothetical protein; COG: NOG14120 non supervised orthologous group. (86 aa)    
Predicted Functional Partners:
yciU
COG: COG3099 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.96; Belongs to the UPF0263 family.
      
 0.807
ABX20979.1
COG: COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC; Psort location: Periplasmic, score:9.76.
  
    0.617
ABX21436.1
COG: COG1289 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:10.00.
     
 0.617
ABX20664.1
COG: COG4807 Uncharacterized protein conserved in bacteria.
      
 0.616
ABX21221.1
Hypothetical protein; COG: COG0668 Small-conductance mechanosensitive channel; Psort location: CytoplasmicMembrane, score:10.00.
       0.521
ABX22218.1
Hypothetical protein; COG: NOG15356 non supervised orthologous group.
      
 0.487
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.