Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABX21265.1Hypothetical protein; KEGG: mja:MJ0555 0.0034 endoglucanase K01179; COG: COG1363 Cellulase M and related proteins. (73 aa)    
Predicted Functional Partners:
ABX21266.1
Hypothetical protein; KEGG: sty:STY1453 4.1e-87 rimL; ribosomal-protein-serine acetyltransferase K03817; COG: COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; Psort location: Cytoplasmic, score:9.26.
       0.492
ABX23426.1
Hypothetical protein; KEGG: eco:b3897 5.2e-25 frvR; predicted regulator K00924; COG: COG3711 Transcriptional antiterminator; Psort location: Cytoplasmic, score:8.96.
  
  
 0.448
ABX23427.1
Hypothetical protein; KEGG: eco:b3897 4.2e-13 frvR; predicted regulator K00924; COG: COG3711 Transcriptional antiterminator.
  
  
 0.448
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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