STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hdeBHypothetical protein; Required for optimal acid stress protection, which is important for survival of enteric bacteria in the acidic environment of the host stomach. Exhibits a chaperone-like activity at acidic pH by preventing the aggregation of many different periplasmic proteins. Belongs to the HdeB family. (109 aa)    
Predicted Functional Partners:
ABX20466.1
Hypothetical protein; KEGG: eci:UTI89_C0120 1.3e-05 aroP; aromatic amino acid transport protein AroP K03293; COG: COG0531 Amino acid transporters; Psort location: CytoplasmicMembrane, score:10.00.
   
  
 0.645
ABX22054.1
Hypothetical protein; KEGG: pfa:PF08_0034 0.00065 gcn5; histone acetyltransferase Gcn5, putative K00653; COG: NOG09755 non supervised orthologous group.
      
 0.609
ABX21026.1
Hypothetical protein; COG: COG3065 Starvation-inducible outer membrane lipoprotein.
   
  
 0.508
ABX21307.1
Hypothetical protein; COG: NOG09007 non supervised orthologous group.
       0.483
ABX21304.1
Hypothetical protein; KEGG: pfl:PFL_0043 1.7e-42 osmC; hydroperoxide resistance protein OsmC K04063; COG: COG1764 Predicted redox protein, regulator of disulfide bond formation.
  
    0.444
ABX23663.1
Hypothetical protein; Virulence factor required for growth in low Mg(2+) medium and for intramacrophage survival. May be involved in regulating membrane potential by activating Na(+)/K(+)-ATPase. Belongs to the MgtC/SapB family.
   
    0.426
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.