Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABX21450.1KEGG: ani:AN1180.2 7.9e-06 hypothetical protein K04428; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00. (401 aa)    
Predicted Functional Partners:
ABX21449.1
Hypothetical protein; KEGG: shn:Shewana3_3435 0.00016 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
   
 0.727
ABX21340.1
Hypothetical protein; KEGG: cal:orf19.2425 6.2e-05 highly conserved hypothetical protein K01804; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
      
 0.561
ABX21004.1
Hypothetical protein; KEGG: sgl:SG1466 4.6e-07 dethiobiotin synthase K01935; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 0.464
ABX21451.1
Hypothetical protein; KEGG: stt:t1295 3.0e-210 cfa; cyclopropane-fatty-acyl-phospholipid synthase K00574; COG: COG2230 Cyclopropane fatty acid synthase and related methyltransferases; Psort location: Cytoplasmic, score:9.97.
       0.413
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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