STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX21450.1KEGG: ani:AN1180.2 7.9e-06 hypothetical protein K04428; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00. (401 aa)    
Predicted Functional Partners:
ABX21340.1
Hypothetical protein; KEGG: cal:orf19.2425 6.2e-05 highly conserved hypothetical protein K01804; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
   
  
 0.797
ABX21449.1
Hypothetical protein; KEGG: shn:Shewana3_3435 0.00016 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
   
 0.746
ABX24095.1
Hypothetical protein; COG: COG0767 ABC-type transport system involved in resistance to organic solvents, permease component; Psort location: CytoplasmicMembrane, score:10.00.
      
 0.479
aaeA
Hypothetical protein; Forms an efflux pump with AaeB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
 
 0.475
ABX21004.1
Hypothetical protein; KEGG: sgl:SG1466 4.6e-07 dethiobiotin synthase K01935; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
  
    0.447
ABX21451.1
Hypothetical protein; KEGG: stt:t1295 3.0e-210 cfa; cyclopropane-fatty-acyl-phospholipid synthase K00574; COG: COG2230 Cyclopropane fatty acid synthase and related methyltransferases; Psort location: Cytoplasmic, score:9.97.
       0.419
mdtG
Hypothetical protein; KEGG: ace:Acel_1971 1.7e-05 dTMP kinase K00943; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
  
  
 0.414
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.