Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABX21243.1 | ABX21762.1 | SARI_01343 | SARI_01879 | Hypothetical protein; COG: COG3791 Uncharacterized conserved protein. | COG: COG3755 Uncharacterized protein conserved in bacteria. | 0.525 |
ABX21291.1 | ABX21762.1 | SARI_01393 | SARI_01879 | Hypothetical protein; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.96. | COG: COG3755 Uncharacterized protein conserved in bacteria. | 0.579 |
ABX21291.1 | ABX22033.1 | SARI_01393 | SARI_02156 | Hypothetical protein; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; KEGG: shn:Shewana3_3063 0.0063 phosphatidylglycerophosphatase K01094; COG: COG1629 Outer membrane receptor proteins, mostly Fe transport; Psort location: OuterMembrane, score:10.00. | 0.643 |
ABX21291.1 | ABX22234.1 | SARI_01393 | SARI_02371 | Hypothetical protein; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; KEGG: dre:562769 9.7e-06 LOC562769; similar to Serine/threonine-protein kinase 10 (Lymphocyte-oriented kinase) K08837; COG: COG1076 DnaJ-domain-containing proteins 1; Psort location: Cytoplasmic, score:8.96. | 0.726 |
ABX21761.1 | ABX21762.1 | SARI_01878 | SARI_01879 | Hypothetical protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | COG: COG3755 Uncharacterized protein conserved in bacteria. | 0.818 |
ABX21762.1 | ABX21243.1 | SARI_01879 | SARI_01343 | COG: COG3755 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG: COG3791 Uncharacterized conserved protein. | 0.525 |
ABX21762.1 | ABX21291.1 | SARI_01879 | SARI_01393 | COG: COG3755 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.96. | 0.579 |
ABX21762.1 | ABX21761.1 | SARI_01879 | SARI_01878 | COG: COG3755 Uncharacterized protein conserved in bacteria. | Hypothetical protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family. | 0.818 |
ABX21762.1 | ABX22033.1 | SARI_01879 | SARI_02156 | COG: COG3755 Uncharacterized protein conserved in bacteria. | Hypothetical protein; KEGG: shn:Shewana3_3063 0.0063 phosphatidylglycerophosphatase K01094; COG: COG1629 Outer membrane receptor proteins, mostly Fe transport; Psort location: OuterMembrane, score:10.00. | 0.406 |
ABX21762.1 | ABX22234.1 | SARI_01879 | SARI_02371 | COG: COG3755 Uncharacterized protein conserved in bacteria. | Hypothetical protein; KEGG: dre:562769 9.7e-06 LOC562769; similar to Serine/threonine-protein kinase 10 (Lymphocyte-oriented kinase) K08837; COG: COG1076 DnaJ-domain-containing proteins 1; Psort location: Cytoplasmic, score:8.96. | 0.467 |
ABX22033.1 | ABX21291.1 | SARI_02156 | SARI_01393 | Hypothetical protein; KEGG: shn:Shewana3_3063 0.0063 phosphatidylglycerophosphatase K01094; COG: COG1629 Outer membrane receptor proteins, mostly Fe transport; Psort location: OuterMembrane, score:10.00. | Hypothetical protein; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.96. | 0.643 |
ABX22033.1 | ABX21762.1 | SARI_02156 | SARI_01879 | Hypothetical protein; KEGG: shn:Shewana3_3063 0.0063 phosphatidylglycerophosphatase K01094; COG: COG1629 Outer membrane receptor proteins, mostly Fe transport; Psort location: OuterMembrane, score:10.00. | COG: COG3755 Uncharacterized protein conserved in bacteria. | 0.406 |
ABX22234.1 | ABX21291.1 | SARI_02371 | SARI_01393 | Hypothetical protein; KEGG: dre:562769 9.7e-06 LOC562769; similar to Serine/threonine-protein kinase 10 (Lymphocyte-oriented kinase) K08837; COG: COG1076 DnaJ-domain-containing proteins 1; Psort location: Cytoplasmic, score:8.96. | Hypothetical protein; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.96. | 0.726 |
ABX22234.1 | ABX21762.1 | SARI_02371 | SARI_01879 | Hypothetical protein; KEGG: dre:562769 9.7e-06 LOC562769; similar to Serine/threonine-protein kinase 10 (Lymphocyte-oriented kinase) K08837; COG: COG1076 DnaJ-domain-containing proteins 1; Psort location: Cytoplasmic, score:8.96. | COG: COG3755 Uncharacterized protein conserved in bacteria. | 0.467 |