STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX21891.1Hypothetical protein; KEGG: shn:Shewana3_3435 1.8e-05 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.97; Belongs to the LysR transcriptional regulatory family. (303 aa)    
Predicted Functional Partners:
ABX21892.1
Hypothetical protein; KEGG: shn:Shewana3_3385 3.6e-33 hypoxanthine phosphoribosyltransferase K00760; COG: COG1741 Pirin-related protein; Belongs to the pirin family.
 
 
 
 0.974
ABX21893.1
Hypothetical protein; KEGG: psp:PSPPH_0909 1.1e-47 isochorismatase family protein K05993; COG: COG1335 Amidases related to nicotinamidase.
 
     0.761
ABX20644.1
Hypothetical protein; KEGG: shn:Shewana3_3435 2.6e-10 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.26; Belongs to the LysR transcriptional regulatory family.
  
     0.697
ABX22079.1
Hypothetical protein; KEGG: shn:Shewana3_3435 0.0021 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.97; Belongs to the LysR transcriptional regulatory family.
  
     0.558
ABX23042.1
Hypothetical protein; COG: NOG18555 non supervised orthologous group.
      
 0.495
ABX21876.1
Hypothetical protein; KEGG: reh:H16_A0619 2.5e-16 YcaC related amidohydrolase K00517; COG: COG1335 Amidases related to nicotinamidase.
  
     0.487
ABX21877.1
Hypothetical protein; KEGG: reh:H16_A1689 2.2e-10 ycaC; YcaC related amidohydrolase K00517; COG: COG1335 Amidases related to nicotinamidase.
  
     0.469
ABX23355.1
Hypothetical protein; KEGG: shn:Shewana3_3435 4.6e-24 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.97; Belongs to the LysR transcriptional regulatory family.
  
     0.457
ABX20537.1
Hypothetical protein; KEGG: shn:Shewana3_3435 3.0e-20 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.26; Belongs to the LysR transcriptional regulatory family.
  
     0.447
ABX24152.1
Hypothetical protein; KEGG: shn:Shewana3_3435 9.7e-11 transcriptional regulator, LysR family K06022; COG: COG0583 Transcriptional regulator; Psort location: Cytoplasmic, score:9.26; Belongs to the LysR transcriptional regulatory family.
  
     0.443
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.