Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABX22028.1Hypothetical protein; KEGG: tpe:Tpen_1086 0.0079 proton-translocating NADH-quinone oxidoreductase, chain M; COG: NOG06795 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:10.00. (403 aa)    
Predicted Functional Partners:
ABX22029.1
Hypothetical protein; KEGG: ecc:c3627 1.1e-283 iucA; iucA protein K03894; COG: COG4264 Siderophore synthetase component.
 
     0.822
ABX22033.1
Hypothetical protein; KEGG: shn:Shewana3_3063 0.0063 phosphatidylglycerophosphatase K01094; COG: COG1629 Outer membrane receptor proteins, mostly Fe transport; Psort location: OuterMembrane, score:10.00.
 
   
 0.752
ABX22031.1
Hypothetical protein; KEGG: ecc:c3625 1.1e-294 iucC; iucC protein K03895; COG: COG4264 Siderophore synthetase component.
 
    0.751
ABX22030.1
Hypothetical protein; KEGG: sfl:SF3716 4.7e-157 iucB; IucB K03896; COG: COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; Psort location: Cytoplasmic, score:8.96.
 
     0.742
ABX22032.1
Hypothetical protein; KEGG: ssn:SSO_3604 2.4e-201 iucD; lysine:N6-hydroxylase K03897; COG: COG3486 Lysine/ornithine N-monooxygenase; Psort location: CytoplasmicMembrane, score:9.96.
 
     0.698
ABX23667.1
Hypothetical protein; KEGG: sty:STY4832 0. Bacteriophage P4 DNA primase; COG: COG4643 Uncharacterized protein conserved in bacteria.
  
     0.471
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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