Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABX22265.1Hypothetical protein; KEGG: eci:UTI89_C2514 5.6e-54 yfaL; hypothetical protein YfaL precursor K07279; COG: COG3468 Type V secretory pathway, adhesin AidA; Psort location: OuterMembrane, score:9.83. (804 aa)    
Predicted Functional Partners:
ABX22264.1
Hypothetical protein; KEGG: sec:SC2613 2.1e-42 enpP; hypothetical protein K01423; COG: NOG10270 non supervised orthologous group.
       0.773
ABX21482.1
Hypothetical protein; COG: NOG20795 non supervised orthologous group.
      
 0.701
ABX20030.1
Hypothetical protein; COG: COG4789 Type III secretory pathway, component EscV; Psort location: CytoplasmicMembrane, score:10.00.
   
  
 0.600
ABX21792.1
Hypothetical protein; KEGG: lsa:LSA0897 1.2e-73 pepD5; dipeptidase D-type (U34 family) K01274; COG: COG4690 Dipeptidase.
      
 0.585
ABX21793.1
Hypothetical protein; COG: NOG06178 non supervised orthologous group.
      
 0.575
ABX22263.1
Hypothetical protein.
       0.538
ABX20725.1
Hypothetical protein; KEGG: rsp:RSP_4084 1.3e-06 predicted acetyltransferase K00903; COG: COG3765 Chain length determinant protein; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.487
ABX21629.1
Hypothetical protein; KEGG: nma:NMA0905 5.0e-94 iga; IgA1 protease K01347; COG: COG3468 Type V secretory pathway, adhesin AidA.
  
   
 0.477
ABX21492.1
Hypothetical protein; KEGG: pai:PAE2861 3.5e-06 molybdopterin oxidoreductase, membrane subunit K00185; COG: NOG06755 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:10.00.
  
   
 0.454
ABX22565.1
COG: COG3515 Uncharacterized protein conserved in bacteria.
  
     0.432
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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