Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ABX22288.1Hypothetical protein; KEGG: pen:PSEEN1885 1.6e-60 ABC transporter, ATP-binding protein; COG: COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component; Psort location: CytoplasmicMembrane, score:7.88. (228 aa)    
Predicted Functional Partners:
ABX22287.1
Hypothetical protein; COG: COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 
 0.964
ABX22289.1
Hypothetical protein; KEGG: spt:SPA2216 2.5e-96 tesA; acyl-coA thioesterase I K01076; COG: COG2755 Lysophospholipase L1 and related esterases; Psort location: Periplasmic, score:10.00.
 
 
   0.927
rplL
Hypothetical protein; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
    
   0.820
ABX21988.1
Hypothetical protein; KEGG: fal:FRAAL1796 1.9e-11 putative ABC transporter ATP-binding subunit; COG: COG0842 ABC-type multidrug transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
      0.606
rpsK
Hypothetical protein; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
  
     0.584
tsaD
Hypothetical protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
     0.584
cbiO
Hypothetical protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. Presumably responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Cobalt importer (TC 3.A.1.18.1) family.
  
     0.578
rpsE
Hypothetical protein; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.
  
     0.556
ABX22290.1
Hypothetical protein; KEGG: sty:STY0551 3.4e-131 ybbO; hypothetical oxidoreductase; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score:9.26.
     
 0.537
ABX21169.1
Hypothetical protein; KEGG: ret:RHE_CH00739 6.4e-66 dppDch1, dppFch1; dipeptide ABC transporter, ATP-binding protein K02031; COG: COG4170 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score:8.02.
 
    
0.517
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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