STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX22289.1Hypothetical protein; KEGG: spt:SPA2216 2.5e-96 tesA; acyl-coA thioesterase I K01076; COG: COG2755 Lysophospholipase L1 and related esterases; Psort location: Periplasmic, score:10.00. (194 aa)    
Predicted Functional Partners:
ABX22287.1
Hypothetical protein; COG: COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component; Psort location: CytoplasmicMembrane, score:10.00.
 
     0.910
ABX22522.1
Hypothetical protein; COG: NOG24180 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
 
 0.803
ABX22288.1
Hypothetical protein; KEGG: pen:PSEEN1885 1.6e-60 ABC transporter, ATP-binding protein; COG: COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component; Psort location: CytoplasmicMembrane, score:7.88.
 
     0.801
ABX22328.1
Hypothetical protein; KEGG: sec:SC0507 3.5e-152 tesB; acyl-CoA thioesterase II K01076; COG: COG1946 Acyl-CoA thioesterase.
      
 0.801
ABX22290.1
Hypothetical protein; KEGG: sty:STY0551 3.4e-131 ybbO; hypothetical oxidoreductase; COG: COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Psort location: Cytoplasmic, score:9.26.
  
  
 0.658
ABX22934.1
COG: COG3210 Large exoproteins involved in heme utilization or adhesion.
   
 
 0.619
ABX22339.1
Hypothetical protein; KEGG: gbe:GbCGDNIH1_1102 1.0e-10 short-chain acyl-CoA hydrolase; COG: COG0824 Predicted thioesterase.
   
  
 0.532
birA
Hypothetical protein; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.
     
 0.489
cysG
Hypothetical protein; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
     
 0.477
ABX22495.1
Hypothetical protein; COG: NOG23139 non supervised orthologous group.
  
 
 0.457
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.