close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX22295.1COG: COG1585 Membrane protein implicated in regulation of membrane protease activity; Psort location: CytoplasmicMembrane, score:9.46. (153 aa)    
Predicted Functional Partners:
ABX22294.1
Hypothetical protein; KEGG: reh:H16_A2036 4.4e-58 membrane protease subunits, stomatin/prohibitin homologs K01423; COG: COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
 
  
 0.966
cobS
Hypothetical protein; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
   
    0.769
lysS
Hypothetical protein; KEGG: stm:STM3040 7.6e-269 lysS; lysine tRNA synthetase, constitutive K04567; COG: COG1190 Lysyl-tRNA synthetase (class II); Psort location: Cytoplasmic, score:10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
     
 0.632
ABX22292.1
Hypothetical protein; COG: COG0390 ABC-type uncharacterized transport system, permease component; Psort location: CytoplasmicMembrane, score:10.00.
     
 0.557
ABX22293.1
Hypothetical protein; KEGG: psb:Psyr_0081 1.2e-27 ABC transporter K02045; COG: COG4619 ABC-type uncharacterized transport system, ATPase component; Psort location: CytoplasmicMembrane, score:7.88.
       0.537
ABX23103.1
Hypothetical protein; HflC and HflK could regulate a protease.
 
  
 0.418
ABX21818.1
COG: COG3304 Predicted membrane protein.
   
    0.410
ABX23104.1
Hypothetical protein; HflC and HflK could encode or regulate a protease.
 
  
 0.410
ABX21184.1
Hypothetical protein; COG: COG1983 Putative stress-responsive transcriptional regulator.
 
    0.405
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.