STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX22314.1Hypothetical protein; COG: NOG18531 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96. (55 aa)    
Predicted Functional Partners:
ABX22313.1
Hypothetical protein; COG: COG3923 Primosomal replication protein N; Psort location: Cytoplasmic, score:8.96.
     
 0.802
ABX20141.1
COG: COG2990 Uncharacterized protein conserved in bacteria.
  
     0.633
ABX21545.1
Hypothetical protein; COG: NOG07880 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
      
 0.620
ABX21240.1
COG: COG3784 Uncharacterized protein conserved in bacteria.
      
 0.613
sufE
Hypothetical protein; Participates in cysteine desulfuration mediated by SufS. Cysteine desulfuration mobilizes sulfur from L-cysteine to yield L- alanine and constitutes an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Functions as a sulfur acceptor for SufS, by mediating the direct transfer of the sulfur atom from the S-sulfanylcysteine of SufS, an intermediate product of cysteine desulfuration process; Belongs to the SufE family.
      
 0.605
ABX20370.1
Hypothetical protein; COG: NOG08687 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.581
torD
Hypothetical protein; Involved in the biogenesis of TorA. Acts on TorA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; Belongs to the TorD/DmsD family. TorD subfamily.
  
     0.550
ABX22312.1
COG: COG2832 Uncharacterized protein conserved in bacteria; Psort location: CytoplasmicMembrane, score:9.46.
       0.531
rsmF
Hypothetical protein; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA.
  
   
 0.529
ABX22304.1
Hypothetical protein; KEGG: stm:STM0491 6.8e-236 gsk; inosine-guanosine kinase K00892; COG: COG0524 Sugar kinases, ribokinase family.
  
     0.525
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.