Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABX22314.1Hypothetical protein; COG: NOG18531 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96. (55 aa)    
Predicted Functional Partners:
ABX22313.1
Hypothetical protein; COG: COG3923 Primosomal replication protein N; Psort location: Cytoplasmic, score:8.96.
     
 0.821
ABX20141.1
COG: COG2990 Uncharacterized protein conserved in bacteria.
  
     0.633
ABX20370.1
Hypothetical protein; COG: NOG08687 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.581
ABX21240.1
COG: COG3784 Uncharacterized protein conserved in bacteria.
      
 0.570
ABX21545.1
Hypothetical protein; COG: NOG07880 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
      
 0.570
torD
Hypothetical protein; Involved in the biogenesis of TorA. Acts on TorA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; Belongs to the TorD/DmsD family. TorD subfamily.
  
     0.550
ABX22312.1
COG: COG2832 Uncharacterized protein conserved in bacteria; Psort location: CytoplasmicMembrane, score:9.46.
       0.531
ABX22304.1
Hypothetical protein; KEGG: stm:STM0491 6.8e-236 gsk; inosine-guanosine kinase K00892; COG: COG0524 Sugar kinases, ribokinase family.
  
     0.525
rsmF
Hypothetical protein; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA.
  
   
 0.506
ABX22618.1
Hypothetical protein; KEGG: bam:Bamb_1428 2.2e-32 chitinase K01183; COG: COG3979 Uncharacterized protein contain chitin-binding domain type 3; Psort location: Periplasmic, score:9.84.
  
     0.505
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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