STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX22318.1Hypothetical protein; KEGG: saz:Sama_0326 0.0047 phosphopantothenoylcysteine decarboxylase, phosphopantothenate--cysteine ligase K01598:K01922; COG: COG0845 Membrane-fusion protein; Psort location: CytoplasmicMembrane, score:8.60. (397 aa)    
Predicted Functional Partners:
ABX22319.1
Hypothetical protein; KEGG: eci:UTI89_C2351 2.1e-108 yegO; hypothetical protein YegO K07789; COG: COG0841 Cation/multidrug efflux pump; Psort location: CytoplasmicMembrane, score:10.00.
 0.999
ABX24218.1
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score:10.00.
 
 0.999
macB
Hypothetical protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.995
ABX20338.1
Hypothetical protein; KEGG: eci:UTI89_C2351 3.6e-111 yegO; hypothetical protein YegO K07789; COG: COG0841 Cation/multidrug efflux pump; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.985
ABX24021.1
Hypothetical protein; KEGG: eci:UTI89_C2351 3.8e-107 yegO; hypothetical protein YegO K07789; COG: COG0841 Cation/multidrug efflux pump; Psort location: CytoplasmicMembrane, score:10.00.
 
 0.985
ABX22317.1
Hypothetical protein; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.96.
  
  
 0.940
mdtB
Hypothetical protein; KEGG: eci:UTI89_C2351 5.9e-253 yegO; hypothetical protein YegO K07789; COG: COG0841 Cation/multidrug efflux pump; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtB subfamily.
 
 0.925
ABX21352.1
Hypothetical protein; KEGG: bat:BAS3585 1.9e-09 Ada regulatory protein/6-O-methylguanine-DNA methyltransferase K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.97.
      
 0.876
ABX20106.1
Hypothetical protein; COG: COG1566 Multidrug resistance efflux pump.
 
  
 0.871
ABX20105.1
Hypothetical protein; KEGG: sgl:SG1466 5.5e-07 dethiobiotin synthase K01935; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: CytoplasmicMembrane, score:10.00.
  
   
 0.824
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.