Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABX22319.1Hypothetical protein; KEGG: eci:UTI89_C2351 2.1e-108 yegO; hypothetical protein YegO K07789; COG: COG0841 Cation/multidrug efflux pump; Psort location: CytoplasmicMembrane, score:10.00. (1049 aa)    
Predicted Functional Partners:
ABX22318.1
Hypothetical protein; KEGG: saz:Sama_0326 0.0047 phosphopantothenoylcysteine decarboxylase, phosphopantothenate--cysteine ligase K01598:K01922; COG: COG0845 Membrane-fusion protein; Psort location: CytoplasmicMembrane, score:8.60.
 0.999
ABX24218.1
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score:10.00.
 
 0.986
ABX20649.1
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score:10.00.
 0.925
ABX24022.1
COG: COG0845 Membrane-fusion protein; Psort location: CytoplasmicMembrane, score:8.60; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.907
mdtA
COG: COG0845 Membrane-fusion protein; Psort location: CytoplasmicMembrane, score:8.02; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.823
ABX22317.1
Hypothetical protein; COG: COG1309 Transcriptional regulator; Psort location: Cytoplasmic, score:8.96.
     
 0.784
ABX21900.1
Hypothetical protein; KEGG: pha:PSHAa0392 0.0061 aceF; pyruvate dehydrogenase dihydrolipoyltransacetylase subunit K00627; COG: COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.751
ABX21352.1
Hypothetical protein; KEGG: bat:BAS3585 1.9e-09 Ada regulatory protein/6-O-methylguanine-DNA methyltransferase K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.97.
      
 0.707
ABX23241.1
Hypothetical protein; KEGG: bat:BAS3585 3.4e-12 Ada regulatory protein/6-O-methylguanine-DNA methyltransferase K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.97.
      
 0.701
ABX23221.1
COG: COG1538 Outer membrane protein; Psort location: OuterMembrane, score:10.00.
 
 0.632
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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