STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX22322.1Hypothetical protein; KEGG: stm:STM0472 2.9e-93 maa; maltose o-acetyltransferase K00661; COG: COG0110 Acetyltransferase (isoleucine patch superfamily); Psort location: Cytoplasmic, score:9.97. (183 aa)    
Predicted Functional Partners:
ABX24456.1
Hypothetical protein; KEGG: stm:STM2971 9.4e-239 sdaB; L-serine dehydratase (L-threonine deaminase 2) K01752; COG: COG1760 L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
      
 0.810
ABX20702.1
Hypothetical protein; KEGG: sec:SC2117 0. wzc; putative tyrosine-protein kinase in colanic acid export K00903; COG: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; Psort location: CytoplasmicMembrane, score:7.88.
  
  
 0.547
ABX22323.1
Hypothetical protein; COG: NOG07873 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
       0.505
ABX22321.1
Hypothetical protein; COG: NOG13543 non supervised orthologous group.
  
    0.503
ABX20713.1
Hypothetical protein; KEGG: sec:SC2106 2.9e-260 manC; mannose-1-phosphate in colanic acid gene cluster K00971; COG: COG0662 Mannose-6-phosphate isomerase; Psort location: Cytoplasmic, score:8.96.
  
  
 0.472
ABX22320.1
Hypothetical protein; COG: NOG09846 non supervised orthologous group.
  
    0.468
ABX20526.1
Hypothetical protein; KEGG: eci:UTI89_C2535 2.5e-87 yfbE; putative glutamine-scyllo-inositol transaminase K07806; COG: COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Psort location: Cytoplasmic, score:8.96; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.404
wecE
Hypothetical protein; Catalyzes the synthesis of dTDP-4-amino-4,6-dideoxy-D- galactose (dTDP-Fuc4N) from dTDP-4-keto-6-deoxy-D-glucose (dTDP-D- Glc4O) and L-glutamate; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.404
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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