rpmE2 protein (Salmonella enterica arizonae)

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Score

rpmE2

COG: COG0254 Ribosomal protein L31. (86 aa)

Predicted Functional Partners:

rpsT

0.977

rplS

0.972

rpsP

0.968

rpmF

0.967

rpmG

0.965

rpsR

0.960

rplT

0.959

rplM

0.959

rpsI

0.959

rpmA

0.959

Your Current Organism:

Salmonella enterica arizonae

NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplS	SARI_04279	SARI_00253	Hypothetical protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.998
rplM	rplT	SARI_04279	SARI_01633	Hypothetical protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.998
rplM	rpmA	SARI_04279	SARI_04321	Hypothetical protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.998
rplM	rpmE2	SARI_04279	SARI_02464	Hypothetical protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0254 Ribosomal protein L31.	0.959
rplM	rpmF	SARI_04279	SARI_01807	Hypothetical protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.996
rplM	rpmG	SARI_04279	SARI_03913	Hypothetical protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.996
rplM	rpsI	SARI_04279	SARI_04280	Hypothetical protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0103 Ribosomal protein S9; Psort location: Cytoplasmic, score:8.96; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsP	SARI_04279	SARI_00250	Hypothetical protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG: COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.997
rplM	rpsR	SARI_04279	SARI_03239	Hypothetical protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.998
rplM	rpsT	SARI_04279	SARI_02950	Hypothetical protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein; Binds directly to 16S ribosomal RNA.	0.996
rplS	rplM	SARI_00253	SARI_04279	Hypothetical protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Hypothetical protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.998
rplS	rplT	SARI_00253	SARI_01633	Hypothetical protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Hypothetical protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.997
rplS	rpmA	SARI_00253	SARI_04321	Hypothetical protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	COG: COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplS	rpmE2	SARI_00253	SARI_02464	Hypothetical protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	COG: COG0254 Ribosomal protein L31.	0.972
rplS	rpmF	SARI_00253	SARI_01807	Hypothetical protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	COG: COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.995
rplS	rpmG	SARI_00253	SARI_03913	Hypothetical protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	COG: COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.981
rplS	rpsI	SARI_00253	SARI_04280	Hypothetical protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	COG: COG0103 Ribosomal protein S9; Psort location: Cytoplasmic, score:8.96; Belongs to the universal ribosomal protein uS9 family.	0.995
rplS	rpsP	SARI_00253	SARI_00250	Hypothetical protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	COG: COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.999
rplS	rpsR	SARI_00253	SARI_03239	Hypothetical protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Hypothetical protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.999
rplS	rpsT	SARI_00253	SARI_02950	Hypothetical protein; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	Hypothetical protein; Binds directly to 16S ribosomal RNA.	0.985

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