STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX22333.1Hypothetical protein; KEGG: reh:H16_A0776 5.9e-79 ABC-type transporter, ATPase and permease components: Prot2E family; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score:10.00. (565 aa)    
Predicted Functional Partners:
ABX22332.1
Hypothetical protein; KEGG: cch:Cag_0453 5.2e-71 ATPase K06147; COG: COG1132 ABC-type multidrug transport system, ATPase and permease components; Psort location: CytoplasmicMembrane, score:10.00.
 
 
 
0.987
metN-2
Hypothetical protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.864
potA-2
Hypothetical protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
   
0.830
ABX22335.1
Hypothetical protein; COG: COG1522 Transcriptional regulators.
  
    0.549
ABX21980.1
Hypothetical protein; COG: NOG13870 non supervised orthologous group.
  
     0.484
ABX22850.1
Hypothetical protein; KEGG: ece:Z5988 1.9e-98 putative lipoate-protein ligase A K03800:K07186; COG: COG3726 Uncharacterized membrane protein affecting hemolysin expression.
  
     0.449
ABX22331.1
Hypothetical protein; KEGG: pmn:PMN2A_0116 0.0078 3-dehydroquinate synthase K01735; COG: COG0347 Nitrogen regulatory protein PII; Psort location: Cytoplasmic, score:8.96; Belongs to the P(II) protein family.
       0.439
ABX20897.1
Hypothetical protein; KEGG: spt:SPA0918 2.2e-120 yecC; putative ABC transport ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score:7.88.
 
     
0.427
ABX21663.1
Hypothetical protein; KEGG: reu:Reut_B4338 0.0018 copper/zinc superoxide dismutase K04565; COG: NOG13874 non supervised orthologous group.
  
     0.416
ABX22334.1
Hypothetical protein; KEGG: sec:SC0500 1.1e-187 putative cysteine synthase/cystathionine beta-synthase K01738; COG: COG0031 Cysteine synthase; Psort location: Cytoplasmic, score:8.96.
  
  
 0.412
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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