STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX22407.1Hypothetical protein; COG: NOG06003 non supervised orthologous group. (364 aa)    
Predicted Functional Partners:
ABX22408.1
Hypothetical protein; KEGG: bur:Bcep18194_A3507 1.7e-27 ABC transporter, fused ATPase and inner membrane subunits K02471; COG: COG1133 ABC-type long-chain fatty acid transport system, fused permease and ATPase components; Psort location: CytoplasmicMembrane, score:10.00.
 
    0.815
ABX21558.1
Hypothetical protein; COG: NOG09763 non supervised orthologous group.
  
     0.493
ABX20370.1
Hypothetical protein; COG: NOG08687 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.456
mdoB
Hypothetical protein; Transfers a phosphoglycerol residue from phosphatidylglycerol to the membrane-bound nascent glucan backbones; Belongs to the OpgB family.
  
     0.455
ABX21390.1
Hypothetical protein; KEGG: spt:SPA1370 4.0e-144 putative secreted protein K04775; COG: COG3591 V8-like Glu-specific endopeptidase; Belongs to the peptidase S1B family.
  
     0.436
ABX23231.1
COG: COG3162 Predicted membrane protein.
  
     0.434
ABX20860.1
COG: COG2354 Uncharacterized protein conserved in bacteria; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.428
ABX21992.1
Hypothetical protein; KEGG: eci:UTI89_C0791 7.3e-42 ybhP; putative DNase; COG: COG3568 Metal-dependent hydrolase.
  
     0.400
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.