STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX22552.1Hypothetical protein; KEGG: stm:STM0316 1.1e-253 pepD; aminoacyl-histidine dipeptidase K01270; COG: COG2195 Di- and tripeptidases; Psort location: Cytoplasmic, score:8.96. (496 aa)    
Predicted Functional Partners:
ABX21834.1
Hypothetical protein; KEGG: stm:STM1057 0. pepN; aminopeptidase N K01256; COG: COG0308 Aminopeptidase N; Psort location: CytoplasmicMembrane, score:9.59.
     
 0.980
gshB
Hypothetical protein; KEGG: stm:STM3095 5.5e-163 gshB; glutathione synthetase K01920; COG: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); Psort location: Cytoplasmic, score:8.96.
     
 0.943
pepA
Hypothetical protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
   
 
 0.940
pepB
Hypothetical protein; Probably plays an important role in intracellular peptide degradation.
   
 
 0.936
ABX23873.1
Hypothetical protein; KEGG: sec:SC3480 6.2e-274 ggt; gamma-glutamyltranspeptidase K00681; COG: COG0405 Gamma-glutamyltransferase; Psort location: Periplasmic, score:9.76.
     
 0.916
gshA
Hypothetical protein; KEGG: sec:SC2753 2.2e-278 gshA; gamma-glutamate-cysteine ligase K01919; COG: COG2918 Gamma-glutamylcysteine synthetase; Psort location: Cytoplasmic, score:8.96; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.
   
 
 0.912
glyA
Hypothetical protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
   
 
 0.908
ybdK
Hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity.
     
  0.900
ABX24239.1
Hypothetical protein; KEGG: stt:t3081 1.2e-201 metC; beta-cystathionase K01760; COG: COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; Psort location: Cytoplasmic, score:9.26.
    
  0.809
ABX21311.1
Hypothetical protein; KEGG: spt:SPA1313 1.7e-216 putative aminotransferase K00842; COG: COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities.
    
  0.806
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.