STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX22700.1Hypothetical protein; COG: COG1459 Type II secretory pathway, component PulF; Psort location: CytoplasmicMembrane, score:10.00. (400 aa)    
Predicted Functional Partners:
ABX22699.1
Hypothetical protein; KEGG: pen:PSEEN2333 2.5e-80 xcpR-2; type II secretion pathway protein E K01509; COG: COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; Psort location: Cytoplasmic, score:9.97.
 
 
 0.999
ABX24427.1
Hypothetical protein; COG: COG2165 Type II secretory pathway, pseudopilin PulG.
  
  
 0.980
ABX22698.1
COG: COG4969 Tfp pilus assembly protein, major pilin PilA; Belongs to the N-Me-Phe pilin family.
 
   
 0.919
ABX23916.1
Hypothetical protein; COG: COG4796 Type II secretory pathway, component HofQ; Psort location: OuterMembrane, score:10.00.
 
 
 
 0.915
ABX24319.1
Hypothetical protein; KEGG: pen:PSEEN2333 2.2e-25 xcpR-2; type II secretion pathway protein E K01509; COG: COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT; Psort location: Cytoplasmic, score:9.97.
 
  
 0.858
ABX21859.1
Hypothetical protein; COG: COG0658 Predicted membrane metal-binding protein; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.815
ABX23974.1
Hypothetical protein; KEGG: sec:SC3376 3.7e-102 hopD; leader peptidase HopD K02506; COG: COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases; Psort location: CytoplasmicMembrane, score:10.00; Belongs to the peptidase A24 family.
 
  
 0.786
ABX22340.1
Hypothetical protein; KEGG: bur:Bcep18194_A5099 0.00031 RNA binding S1; COG: COG1555 DNA uptake protein and related DNA-binding proteins; Psort location: CytoplasmicMembrane, score:9.97.
  
  
 0.696
ABX23252.1
Hypothetical protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
  
    0.605
ABX23912.1
Hypothetical protein; COG: NOG05966 non supervised orthologous group.
   
 
 0.586
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.