STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX22874.1Hypothetical protein; COG: COG2966 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score:10.00. (258 aa)    
Predicted Functional Partners:
yjjB
Hypothetical protein; COG: COG3610 Uncharacterized conserved protein; Psort location: CytoplasmicMembrane, score:9.46.
  
 0.993
ABX22169.1
Hypothetical protein; COG: COG3069 C4-dicarboxylate transporter; Psort location: CytoplasmicMembrane, score:10.00.
  
     0.734
ABX22875.1
Hypothetical protein.
       0.572
ABX22878.1
Hypothetical protein; KEGG: spi:MGAS10750_Spy1680 1.1e-12 replicative DNA helicase K01529; COG: COG1484 DNA replication protein.
     
 0.552
dnaT
Hypothetical protein; This protein is required for primosome-dependent normal DNA replication; it is also involved in inducing stable DNA replication during SOS response. It forms, in concert with DnaB protein and other prepriming proteins DnaC, N, N', N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N'.
       0.533
yqfB
COG: COG3097 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.96; Belongs to the UPF0267 family.
  
     0.514
ABX22018.1
Hypothetical protein; KEGG: stt:t2101 8.0e-226 ybhC; possible pectinesterase precursor K01051; COG: COG4677 Pectin methylesterase.
  
     0.495
ABX21743.1
Hypothetical protein; COG: NOG09737 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.491
ABX22873.1
Hypothetical protein; COG: NOG09075 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
 
     0.473
ABX22181.1
Hypothetical protein; KEGG: stt:t2250 1.2e-133 rna; ribonuclease I precursor K01169; COG: COG3719 Ribonuclease I; Belongs to the RNase T2 family.
  
     0.428
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.