STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX22886.1Hypothetical protein; KEGG: reh:H16_A2683 3.3e-28 response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K01529; COG: COG3933 Transcriptional antiterminator. (921 aa)    
Predicted Functional Partners:
ABX22885.1
Hypothetical protein; KEGG: sec:SC4387 5.6e-67 putative PTS permease K02793; COG: COG2893 Phosphotransferase system, mannose/fructose-specific component IIA.
 
  
 0.977
ABX22223.1
Hypothetical protein; KEGG: stm:STM0577 2.5e-71 putative PTS system, mannose-specific II component K02793; COG: COG2893 Phosphotransferase system, mannose/fructose-specific component IIA.
 
  
 0.960
ABX24087.1
Hypothetical protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
 
 
 0.927
ABX22883.1
Hypothetical protein; KEGG: lsl:LSL_1715 2.0e-32 PTS system, mannose-specific IIC component K00890; COG: COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.891
ABX22884.1
Hypothetical protein; KEGG: sec:SC4388 9.2e-74 ptrB; putative PTS permease K02794; COG: COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB; Psort location: Cytoplasmic, score:9.26.
 
   
 0.876
ABX22880.1
Hypothetical protein; KEGG: lwe:lwe2018 1.1e-43 sugar isomerase domain protein; COG: COG2222 Predicted phosphosugar isomerases; Psort location: Cytoplasmic, score:8.96.
 
    0.867
ABX22882.1
KEGG: hso:HS_0607 1.1e-54 manZ; protein-N(pi)-phosphohistidine-sugar phosphotransferase (mannose-specific phosphotransferase system IID component) K02796; COG: COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.855
ABX20465.1
Hypothetical protein; KEGG: stt:t0504 7.3e-255 putative amino acid decarboxylase K01586; COG: COG0019 Diaminopimelate decarboxylase; Psort location: Cytoplasmic, score:8.96.
  
   
 0.833
ABX21016.1
Hypothetical protein; KEGG: spt:SPA1043 7.0e-163 manX; PTS system, mannose-specific IIAB component K02793:K02794; COG: COG2893 Phosphotransferase system, mannose/fructose-specific component IIA; Psort location: Cytoplasmic, score:9.26.
 
  
 0.796
ABX22225.1
Hypothetical protein; KEGG: eci:UTI89_C2015 1.3e-35 manY; PTS enzyme IIC, mannose-specific K02795; COG: COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC; Psort location: CytoplasmicMembrane, score:10.00.
 
  
 0.784
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.