STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX22893.1Hypothetical protein; KEGG: rme:Rmet_3499 0.0052 ATP synthase F0, C subunit K02110; COG: COG1280 Putative threonine efflux protein; Psort location: CytoplasmicMembrane, score:10.00. (214 aa)    
Predicted Functional Partners:
ABX22892.1
Hypothetical protein; KEGG: tdn:Tmden_1946 3.0e-08 transcriptional regulator, AraC family K00567; COG: COG2207 AraC-type DNA-binding domain-containing proteins; Psort location: Cytoplasmic, score:9.26.
 
     0.808
ABX23502.1
Hypothetical protein; COG: COG1280 Putative threonine efflux protein; Psort location: CytoplasmicMembrane, score:9.46.
  
   
 0.682
ABX21600.1
Hypothetical protein; COG: COG1280 Putative threonine efflux protein; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.629
ABX22891.1
Hypothetical protein; KEGG: reh:H16_A0195 7.0e-60 putative GTPase (G3E family); COG: COG0523 Putative GTPases (G3E family); Psort location: Cytoplasmic, score:8.96.
       0.544
ABX22890.1
Hypothetical protein; COG: COG2879 Uncharacterized small protein.
       0.534
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.