STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yjgACOG: COG3028 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.96; Belongs to the UPF0307 family. (183 aa)    
Predicted Functional Partners:
ABX23900.1
Hypothetical protein; KEGG: bur:Bcep18194_A5099 1.6e-245 RNA binding S1; COG: COG2183 Transcriptional accessory protein; Psort location: Cytoplasmic, score:8.96.
      
 0.876
ABX22275.1
Hypothetical protein; COG: COG2501 Uncharacterized conserved protein.
  
   
 0.829
ABX21695.1
Hypothetical protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes 7- methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids; Belongs to the Maf family. YceF subfamily.
      
 0.816
yeeX
Hypothetical protein; KEGG: pac:PPA1242 0.0036 ATP synthase delta chain K02113; COG: COG2926 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score:8.96; Belongs to the UPF0265 family.
      
 0.804
ABX24045.1
Hypothetical protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
      
 0.804
ABX24109.1
Hypothetical protein; COG: COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein.
  
   
 0.689
ABX23045.1
Hypothetical protein; KEGG: reh:H16_A2705 1.1e-100 pmbA; microcin-processing peptidase 1; COG: COG0312 Predicted Zn-dependent proteases and their inactivated homologs; Psort location: Cytoplasmic, score:9.97.
  
    0.632
ABX20209.1
Hypothetical protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
    
 
 0.595
rpmG
COG: COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.
    
   0.586
ABX23044.1
Hypothetical protein; KEGG: eco:b4236 3.1e-41 cybC; cytochrome b562, truncated (pseudogene); COG: COG3783 Soluble cytochrome b562; Psort location: Periplasmic, score:9.76.
       0.538
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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