STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABX23055.1Hypothetical protein; COG: COG2105 Uncharacterized conserved protein. (114 aa)    
Predicted Functional Partners:
ABX23057.1
COG: COG0729 Outer membrane protein; Psort location: OuterMembrane, score:9.93.
 
   
 0.888
ABX23056.1
Hypothetical protein; KEGG: bmf:BAB1_0046 1.1e-13 family of unknown function DUF490 K01076; COG: COG2911 Uncharacterized protein conserved in bacteria; Psort location: OuterMembrane, score:9.52.
 
     0.844
ABX23256.1
COG: COG2315 Uncharacterized protein conserved in bacteria.
     
 0.713
ABX22065.1
COG: COG3790 Predicted membrane protein; Psort location: CytoplasmicMembrane, score:9.46.
  
     0.648
uspB
Hypothetical protein; COG: NOG09779 non supervised orthologous group.
  
     0.625
ABX20329.1
Hypothetical protein; KEGG: eci:UTI89_C2806 1.2e-66 gcvR; glycine cleavage system transcriptional repressor K03567; COG: COG2716 Glycine cleavage system regulatory protein; Psort location: Cytoplasmic, score:9.97.
  
     0.606
ABX22320.1
Hypothetical protein; COG: NOG09846 non supervised orthologous group.
  
     0.602
ABX20899.1
Hypothetical protein; COG: NOG13894 non supervised orthologous group.
  
     0.598
ABX24055.1
Hypothetical protein; COG: NOG12178 non supervised orthologous group.
  
     0.582
ABX21671.1
Hypothetical protein; COG: COG5633 Predicted periplasmic lipoprotein.
  
     0.578
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.