Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABX23060.1Hypothetical protein; COG: NOG17567 non supervised orthologous group. (68 aa)    
Predicted Functional Partners:
ABX23061.1
Hypothetical protein; COG: COG3054 Predicted transcriptional regulator.
 
     0.866
viaA
COG: COG2425 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; Psort location: Cytoplasmic, score:8.96.
  
     0.772
ABX21147.1
Hypothetical protein; COG: NOG13548 non supervised orthologous group; Psort location: Cytoplasmic, score:8.96.
  
     0.771
crl
Hypothetical protein; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32; Belongs to the Crl family.
  
     0.762
ABX21497.1
COG: COG4238 Murein lipoprotein.
  
     0.758
zapC
Hypothetical protein; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ.
  
     0.754
zapB
Hypothetical protein; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.
  
   
 0.751
ycfP
Hypothetical protein; COG: COG3150 Predicted esterase; Psort location: Cytoplasmic, score:8.96; Belongs to the UPF0227 family.
  
     0.732
ABX23351.1
Hypothetical protein; COG: NOG10261 non supervised orthologous group; Psort location: CytoplasmicMembrane, score:9.50.
  
     0.731
ABX24098.1
Hypothetical protein; COG: COG3113 Predicted NTP binding protein (contains STAS domain).
  
     0.729
Your Current Organism:
Salmonella enterica arizonae
NCBI taxonomy Id: 41514
Other names: S. enterica subsp. arizonae serovar 62:z4,z23:-, Salmonella enterica IIIa 62:z4,z23:-, Salmonella enterica serovar IIIa 62:z4,z23:-, Salmonella enterica subsp. arizonae serovar 62:z4,z23:-
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